GSP
Quick Navigator

Search Site

Unix VPS
A - Starter
B - Basic
C - Preferred
D - Commercial
MPS - Dedicated
Previous VPSs
* Sign Up! *

Support
Contact Us
Online Help
Handbooks
Domain Status
Man Pages

FAQ
Virtual Servers
Pricing
Billing
Technical

Network
Facilities
Connectivity
Topology Map

Miscellaneous
Server Agreement
Year 2038
Credits
 

USA Flag

 

 

Man Pages
BP_NRDB(1) User Contributed Perl Documentation BP_NRDB(1)

bp_nrdb.PLS - a script to emulate Warren Gish's nrdb, make a unique sequence database from a set of input databases

Usage: bp_nrdb.PLS [options] file1 file2 file3

Alternative usage bp_nrdb.PLS -p [options] file1 id1 file2 id2 file3 id3

This script will create a unique database of sequences (quasi-nonredundant). The options are:

   -o filename          - the filename the db is written (STDOUT by default)
   -a filename          - the filename to append the db to
   -l#                  - minimum required sequence length
   -i                   - do not check for duplicates
   -n#                  - max number of descriptions to report per seq
   -d#                  - delimiter to use between consecutive descriptions
   -p                   - use database id prefixes from command line

Jason Stajich, jason-at-bioperl-dot-org
2019-12-07 perl v5.32.1

Search for    or go to Top of page |  Section 1 |  Main Index

Powered by GSP Visit the GSP FreeBSD Man Page Interface.
Output converted with ManDoc.