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Bio::NEXUS::HistoryBlock(3) User Contributed Perl Documentation Bio::NEXUS::HistoryBlock(3)

Bio::NEXUS::HistoryBlock - Represents a HISTORY block of a NEXUS file

$block_object = new Bio::NEXUS::HistoryBlock('history', $block, $verbose);

This is a class representing a history block in NEXUS file

All feedback (bugs, feature enhancements, etc.) are greatly appreciated.

 Chengzhi Liang (liangc@umbi.umd.edu)
 Justin Reese
 Tom Hladish (tjhladish at yahoo)

$Revision: 1.28 $

 Title   : new
 Usage   : block_object = new Bio::NEXUS::HistoryBlock($block_type, $commands, $verbose);
 Function: Creates a new Bio::NEXUS::HistoryBlock object
 Returns : Bio::NEXUS::HistoryBlock object
 Args    : type (string), the commands/comments to parse (array ref), and a verbose flag (0 or 1; optional)
 Comments:

 Name    : equals
 Usage   : $block->equals($another);
 Function: compare if two Block objects are equal
 Returns : boolean 
 Args    : a Block object

 Name    : rename_otus
 Usage   : $nexus->rename_otus(\%translation);
 Function: rename all OTUs 
 Returns : a new nexus object with new OTU names
 Args    : a ref to hash based on OTU name pairs

 Title   : add_otu_clone
 Usage   : ...
 Function: ...
 Returns : ...
 Args    : ...
2007-09-21 perl v5.32.1

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