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| ASN2XML(1) | NCBI Tools User's Manual | ASN2XML(1) |
NAME
asn2xml - translate biological data from ASN.1 to XMLSYNOPSIS
asn2xml [-] [-b F] [-e] [-i filename] [-l filename] [-o filename] [-s]DESCRIPTION
asn2xml converts an NCBI Seq-entry or Bioseq-set from ASN.1 format to an isomorphic XML representation. It differs from asn2asn -x in that it converts packed sequence data back into human-readable ASCII text.OPTIONS
A summary of options is included below.- -
- Print usage message
- -b F
- Input asnfile in text mode
- -e
- Input is a Seq-entry
- -i filename
- Read ASN.1 from filename (default is stdin)
- -l filename
- Log errors to filename (default is stderr)
- -o filename
- Write XML to filename (default is stdout)
- -s
- Input is a Seq-submit
AUTHOR
The National Center for Biotechnology Information.SEE ALSO
asn2all(1), asn2asn(1), asn2ff(1), asn2fsa(1), asn2gb(1), asndhuff(1), gene2xml(1), README.asn2xml, ncbixml.txt| 2005-05-16 | NCBI |
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