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| VCF2DAG(1) | vcf2dag (VCF transformation) | VCF2DAG(1) |
NAME
vcf2dagSYNOPSIS
vcf2dag options []DESCRIPTION
Modify VCF to be able to build a directed acyclic graph (DAG)OPTIONS
-
options: -r, --reference FILE FASTA reference file. Modify the VCF file so that homozygous regions are included as REF/. calls. For each ref and alt allele, assign an index. These steps are sufficient to enable use of the VCF as a DAG (specifically a partially-ordered graph). Type: transformation
EXIT VALUES
- 0
- Success
- not 0
- Failure
SEE ALSO
vcflib(1)OTHER
LICENSE
Copyright 2011-2022 (C) Erik Garrison and vcflib contributors. MIT licensed.AUTHORS
Erik Garrison and vcflib contributors.| vcf2dag (vcflib) |
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