feature-view - Visualize GFF features using Matplotlib
feature-view feature-file.bed
feature-view is a simple script that plots the subfeatures of a
chromosomal feature such as a gene as a horizontal bar graph. The input file
is a BED file containing a single feature such as a gene, with subfeatures
such as introns, exons, and UTRs. Suitable input files are typically generated
by running peak-classifier(1), and then extracting the genes from the
resulting BED file containing augmented GFF features.
peak-classifier peaks.bed features.gff3 overlaps.tsv
extract-genes features.bed
feature-view Genes-features/2-2432432-2423444.bed
peak-classifier(1), filter-overlaps(1), extract-genes(1)
Please report bugs to the author and send patches in unified diff format. (man
diff for more information)