Bio::MAGETAB::Util::Reader::SDRF - SDRF parser class.
use Bio::MAGETAB::Util::Reader::SDRF;
my $parser = Bio::MAGETAB::Util::Reader::SDRF->new({
uri => $sdrf_filename,
});
my $sdrf = $parser->parse();
This class is used to parse SDRF files. It can be used on its own, but more
often you will want to use the main Bio::MAGETAB::Util::Reader class which
handles extended parsing options more transparently.
See the TabFile class for superclass attributes.
- magetab_object
- A Bio::MAGETAB::SDRF object. This can either be set upon instantiation, or
a new object will be created for you. It can be retrieved at any time
using "get_magetab_object".
- parse
- Parse the SDRF pointed to by
"$self->get_uri()". Returns the
Bio::MAGETAB::SDRF object updated with the SDRF contents.
Bio::MAGETAB::Util::Reader::Tabfile Bio::MAGETAB::Util::Reader
Bio::MAGETAB::SDRF
Tim F. Rayner <tfrayner@gmail.com>
This library is released under version 2 of the GNU General Public License
(GPL).