Bio::Phylo::Matrices::Datatype::Restriction - Validator subclass, no serviceable
parts inside
The Bio::Phylo::Matrices::Datatype::* classes are used to validate data
contained by Bio::Phylo::Matrices::Matrix and Bio::Phylo::Matrices::Datum
objects.
- get_ids_for_special_symbols()
- Gets state-to-id mapping for missing and gap symbols
Type : Accessor
Title : get_ids_for_special_symbols
Usage : my %ids = %{ $obj->get_ids_for_special_symbols };
Function: Returns state-to-id mapping
Returns : An empty hash reference
Args : None
Notes : This method is here as an override
because restriction site data has
no missing or gap symbols, just
presence/absence
There is a mailing list at
<https://groups.google.com/forum/#!forum/bio-phylo> for any user or
developer questions and discussions.
- Bio::Phylo::Matrices::Datatype
- This class subclasses Bio::Phylo::Matrices::Datatype.
- Bio::Phylo::Manual
- Also see the manual: Bio::Phylo::Manual and
<http://rutgervos.blogspot.com>.
If you use Bio::Phylo in published research, please cite it:
Rutger A Vos, Jason Caravas, Klaas Hartmann,
Mark A Jensen and Chase Miller, 2011. Bio::Phylo -
phyloinformatic analysis using Perl. BMC Bioinformatics 12:63.
<http://dx.doi.org/10.1186/1471-2105-12-63>