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Bio::Phylo::Matrices::Datatype::Restriction(3) User Contributed Perl Documentation Bio::Phylo::Matrices::Datatype::Restriction(3)

Bio::Phylo::Matrices::Datatype::Restriction - Validator subclass, no serviceable parts inside

The Bio::Phylo::Matrices::Datatype::* classes are used to validate data contained by Bio::Phylo::Matrices::Matrix and Bio::Phylo::Matrices::Datum objects.

get_ids_for_special_symbols()
Gets state-to-id mapping for missing and gap symbols

 Type    : Accessor
 Title   : get_ids_for_special_symbols
 Usage   : my %ids = %{ $obj->get_ids_for_special_symbols };
 Function: Returns state-to-id mapping
 Returns : An empty hash reference
 Args    : None
 Notes   : This method is here as an override
           because restriction site data has
           no missing or gap symbols, just
           presence/absence
    

There is a mailing list at <https://groups.google.com/forum/#!forum/bio-phylo> for any user or developer questions and discussions.
Bio::Phylo::Matrices::Datatype
This class subclasses Bio::Phylo::Matrices::Datatype.
Bio::Phylo::Manual
Also see the manual: Bio::Phylo::Manual and <http://rutgervos.blogspot.com>.

If you use Bio::Phylo in published research, please cite it:

Rutger A Vos, Jason Caravas, Klaas Hartmann, Mark A Jensen and Chase Miller, 2011. Bio::Phylo - phyloinformatic analysis using Perl. BMC Bioinformatics 12:63. <http://dx.doi.org/10.1186/1471-2105-12-63>

2017-10-30 perl v5.32.1

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