Bio::Phylo::NeXML::Meta::XMLLiteral - Annotation value adaptor, no direct usage
No direct usage, is used internally by Bio::Phylo::NeXML::Meta to wrap objects
into a common adaptor class for serialization to XML.
- new()
-
Type : Constructor
Title : new
Usage : my $lit = Bio::Phylo::NeXML::Meta::XMLLiteral->new($obj);
Function: Initializes a Bio::Phylo::NeXML::Meta::XMLLiteral object.
Returns : A Bio::Phylo::NeXML::Meta::XMLLiteral object.
Args : An object (or array ref of objects) to wrap,
either a 'RDF::Core::Model' (or subclass),
an 'XML::XMLWriter' or (subclass) or any
of the following serialization methods
used for duck-typing one of the following classes:
Bio::Phylo => to_xml,
XML::DOM, XML::GDOME, XML::LibXML => toString,
XML::Twig => sprint,
XML::DOM2 => xmlify,
XML::DOMBacked => as_xml,
XML::Handler => dump_tree,
XML::Element => as_XML
XML::API => _as_string,
XML::Code => code
- to_xml()
- Serializes invocant to xml.
Type : Serializer
Title : to_xml
Usage : my $xml = $obj->to_xml;
Function: Turns the invocant object (and its descendants) into an XML string.
Returns : SCALAR
Args : NONE
There is a mailing list at
<https://groups.google.com/forum/#!forum/bio-phylo> for any user or
developer questions and discussions.
- Bio::Phylo::NeXML::Meta
- Bio::Phylo::Manual
- Also see the manual: Bio::Phylo::Manual and
<http://rutgervos.blogspot.com>.
If you use Bio::Phylo in published research, please cite it:
Rutger A Vos, Jason Caravas, Klaas Hartmann,
Mark A Jensen and Chase Miller, 2011. Bio::Phylo -
phyloinformatic analysis using Perl. BMC Bioinformatics 12:63.
<http://dx.doi.org/10.1186/1471-2105-12-63>