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| Bio::Phylo::Parsers::Ubiosearch(3) | User Contributed Perl Documentation | Bio::Phylo::Parsers::Ubiosearch(3) |
NAME
Bio::Phylo::Parsers::Ubiosearch - Parser used by Bio::Phylo::IO, no serviceable parts insideDESCRIPTION
This module parses the XML that is returned by a uBio namebank search. An example of such a record is here: <http://www.ubio.org/webservices/examples/namebank_search.xml>The parser creates a single Bio::Phylo::Taxa object to which the metadata on the search (time, date stamp, uBio version number) are attached. This taxa object is then populated with Bio::Phylo::Taxa::Taxon objects that are annotated with the metadata for each search result.
SEE ALSO
There is a mailing list at <https://groups.google.com/forum/#!forum/bio-phylo> for any user or developer questions and discussions.- Bio::Phylo::IO
- The uBio search result parser is called by the Bio::Phylo::IO object. Look there to learn more about parsing.
- Bio::Phylo::Manual
- Also see the manual: Bio::Phylo::Manual and <http://rutgervos.blogspot.com>
CITATION
If you use Bio::Phylo in published research, please cite it:Rutger A Vos, Jason Caravas, Klaas Hartmann, Mark A Jensen and Chase Miller, 2011. Bio::Phylo - phyloinformatic analysis using Perl. BMC Bioinformatics 12:63. <http://dx.doi.org/10.1186/1471-2105-12-63>
| 2017-10-30 | perl v5.32.1 |
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