Bio::Phylo::Util::Math - Utility math functions
- nchoose_static
- Calculation of n choose j. This version saves partial results for use
later.
Type : Exported function
Title : nchoose_static
Usage : $c = nchoose_static( $n, $j )
Function: Calculation of n choose j.
Returns : n-choose
Args : $n, $j
- nchoose
- Calculation of n choose j. Dynamic version.
Type : Exported function
Title : nchoose
Usage : $c = nchoose( $n, $j )
Function: Calculation of n choose j.
Returns : n-choose
Args : $n, $j
- gcd
- Greatest common denominator - assumes positive integers as input
Type : Exported function
Title : gcd
Usage : $gcd = gcd( $n, $m )
Function: Greatest common denominator
Returns : $gcd
Args : $n, $m
- gcd_divide
- Takes two large integers and attempts to divide them and give the float
answer without overflowing
Type : Exported function
Title : gcd_divide
Usage : $gcd = gcd_divide( $n, $m )
Function: Greatest common denominator
Returns : $gcd
Args : $n, $m
There is a mailing list at
<https://groups.google.com/forum/#!forum/bio-phylo> for any user or
developer questions and discussions.
- Bio::Phylo::Manual
- Also see the manual: Bio::Phylo::Manual and
<http://rutgervos.blogspot.com>.
If you use Bio::Phylo in published research, please cite it:
Rutger A Vos, Jason Caravas, Klaas Hartmann,
Mark A Jensen and Chase Miller, 2011. Bio::Phylo -
phyloinformatic analysis using Perl. BMC Bioinformatics 12:63.
<http://dx.doi.org/10.1186/1471-2105-12-63>